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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5852342
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLYNFLLVL DLKAILLFIF SFLLIADFLR NRKPANFPPG PKALPFVGNM LNLDSQHPHI  60
   61 FFSKLADIYG NVFSFRLGKE SMVVVSGHKL VKEAIVTQGE NFVDRPPNAI AERFYTEPSG 120
  121 GLFFNNGEIW KRQRRFALST LRTFGLGKNT LELSICEEIR HLQEEIENEK GKPFSPAGLF 180
  181 NNAVSNIICQ LVMGRRFDYH DQSFQTMLKY MSEALWLEGS IWGQLYQAFP QVMKYIPGPH 240
  241 NKLFSNFTAI KELLQEEIEK HKKDLDHSNP RDYIDTFLIK MENQQEAELG FTERNLAFCS 300
  301 LDLFLAGTET TATTLLWALL FLIKYPEVQE KVHAEIDRVI GQTRLPSMAD RPNLPYTDAV 360
  361 IHEIQRMSNI VPLNGLRVAS KDTTLGGYFI PKGTAVMPML TSVLFDKTEW ETPDTFNPGH 420
  421 FLDANGKFVK KEAFLPFSAG KRVCLGEGLA KMELFLFLVA LLQKFSFSAP EGVELSTEGI 480
  481 TGITLVPHPY KVSAKAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle