YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149055916, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.25
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGAFLLQG FIQDRAERMA GETPELTLEQ PPQDASTKKL SECLRRIGDE LDNNMELQRM  60
   61 IADVDTDSPR EVFFRVAADM FADGNFNWGR VVALFYFASK LVLKALCTKV PELIRTIMGW 120
  121 TLDFLRERLL VWIQDQGGWD GLLSYFGTPT WQTVTIFVAG VLTASLTIWK KMG

Type	Start	End	Confidence
Cytoplasmic	1	87	0.57
Transmembrane Helix	88	103	0.25
Non-Cytoplasmic	104	148	0.70
Transmembrane Helix	149	169	0.81
Cytoplasmic	170	173	0.68