YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7110585
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAASLFNLS LIRFRSLSSS RFLRLPQSPL RSVSISPRKF RAFSGAAMTT DAKDAGMDAV  60
   61 QRRLMFEDEC ILVDETDRVV GHDSKYNCHL MENIEAKNLL HRAFSVFLFN SNYELLLQQR 120
  121 SKAKVTFPLV WTNTCCSHPL YRDSELIEEN ALGVRNAAQR KLLDELGIVA EDVPVEEFTP 180
  181 LGRMLYKAPS DGKWGEHELD YLLFIVRDVK VEPNPDEVAE IKYVSREGLK ELVRKADAGE 240
  241 EGLKLSPWFR LVVDNFLMKW WDHVEKGTLG EAVDMKTIHK L

Type	Start	End	Confidence
Signal Peptide	1	18	0.61
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	281	0.95