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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46488439, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGASLGPPG RGSLSRLIRL VICVLTLCAL SVQGRSESTE GHSKDLLYKY KLYGDIDEYA  60
   61 YYFLDIDIGT PEQRISLILD TGSSSLSFPC AGCKNCGVHM ENPFNLNNSK TSSILYCENE 120
  121 ECPFKLNCVK GKCEYMQSYC EGSQISGFYF SDVVSVVSYN NERVTFRKLM GCHMHEESLF 180
  181 LYQQATGVLG MSLSKPQGIP TFVNLLFDNA PQLKQVFTIC ISENGGELIA GGYDPAYIVR 240
  241 RGGSKSVSGQ GSGPVSESLS ESGEDPQVAL REAEKIVWEN VTRKYYYYIK VRGLDMFGTN 300
  301 MMSSSKGLEM LVDSGSTFTH IPEDLYNKLN YFFDILCIQD MNNAYDVNKR LKMTNESFNN 360
  361 PLVQFDDFRK SLKSIIAKEN MCVKIVDGVQ CWKYLEGLPD LFVTLSNNYK MKWQPHSYLY 420
  421 KKESFWCKGI EKQVNNKPIL GLTFFKNRQV IFDIQKNRIG FVDANCPSHP THTRPRTYNE 480
  481 YKRKDNIFLK IPFFYLYSLF VVFALSVLLS LVFYVRRLYH MEYSPLPSEG KAPADA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle