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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51465240, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTLRFNGR VVLVTGAGGG LGRAYALAFA ERGASVVVND LRGDFTGVGK GSLSADKVVE  60
   61 EIRRKGGKAV ANYDSVEEGE KIVKTALDAF GRIDIVINNA GILRDRSFSR ISDEDWDKIQ 120
  121 RVHLRGSFLV TRAAWDHMKK QKFGRIIMTS SASRIYGNFG QANYCAAKLG LLGLSNCLAV 180
  181 EGKKNNIHCN TIAPTAGSRM TQSILPEDLV EALKPDYVAP LVLWLCHESC EENGGLFEVG 240
  241 AGWIGKLRWE RSLGALVRQR TQPMTPEAVK ANWTKICDFD NATKPKSIQE SIGSIVEALN 300
  301 KINSGGEVSA NPTSRATSAT TSEFARAIGH KFPPLYSSYA ELDTIMYALG VGASIKEPKD 360
  361 MKFIYEGSSD FSCLPTFGVI LAQKSIMNGG LAEIPGLSIN LAKILHGEQY LELHKPIPRA 420
  421 GKLRCEAIVA DILDKGSGLV ILVDVYTYSG EELICYNQFS IFVVGSGGSG GKRTSDKAKA 480
  481 AVAIPNRPPD AVLTDTTSLN QAALYRLSGD WNPLHIDPNF ASLAGFDKPI LHGLCTFGFS 540
  541 ARHVLQQFAD NDVSRFKAIK VRFAKPVYPG QTLQTEMWKE GNRIHFQTKV QETGGIVISN 600
  601 AYVDLVPASA ISAKTPSEGA GLQSTLVFEE IGRRLQGIGE EVVKKVRAVF EWHITKGENT 660
  661 AAKWTIDLKT GSGKVYQGPA KGSADVTITL SDEDFMEVVL GKLDPQKAVF SGRLKARGNI 720
  721 LLSQKLQMIL KDYAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle