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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16660617
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLLMSKFLV WIIIFGNFFV VHFFLCFKIP NNKITNVLTY DNSKKQRINS RHNTFLYKND  60
   61 TLNKLLNRKK NKHTLFYRSK KEKDIQESGY LYPFDHLEKK KTKFPPDPYI PSEDEKESSI 120
  121 DIFHDKINDD DLMIYEDDDD AKKYFGKTTF NKPNIIQKDE NSEDDQDDDL NDQNDDPINN 180
  181 PTNNLTDNPT NNSTDNPTNN SIDNPTNNSI DNPTNNSIDN PTNNSIDNPT NNSIDNPTNN 240
  241 STDNPINSPN YQQVTQSNII LEEENNTNKT DIEKDIININ FYSSEEKKIA CEMIKDQIYY 300
  301 LLHSSMDKTF IETFNINIES HIVPSEKRIC VSYNMKSHTF KRSISNLSDL IEFSNKLKYV 360
  361 LDERIHKLYY EDKNNENAYL NKTLRKELEI GKKERDVTNL SKKNLQMSIE SSLKLIEKCM 420
  421 QNMYKQNYEI TLHDLKLAYN MLPCKYYGFF LSNLCSTIST LSYYVNDLQG TFNFALKSIK 480
  481 YEPKYNVAWK CLGDAYRSFR KFWQAKNFYD IAIYLGYKDE KGERFEDIVQ ELNNLTENAL 540
  541 KNVDLLKEHM NNSTNIIIKK NIGIVLNKNP DSIGGCYVSY IIEGSKASKK NLHHGDQIVA 600
  601 LNNHVTYGKP IDFCLKAFQK NDGTYDIIFF KGNIIELYGL KAYKYLMKND LFYALFENEQ 660
  661 IVSFKRNETI LFDMKGFGTF SEYGMSKAEF V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle