YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16768390
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRGNLCPI TILPLGRSVQ SASKRINIFG VKDVDYVKSL SKALEPMLKD ESQYQSVIRF  60
   61 DVINEEDGSN SQLKPIFGLN GLSWGLLEDI DAAKDKYWYF GPLRHYASAA SKSFADNWSL 120
  121 KTDYVYTPPC PGCVDCAATV QRQETAQPSG LFTRGLIKYK NNPGETKRPL VKNDNCSKKF 180
  181 EGSAEASQIN INCVQNKDNF AELESQFISS LQPGWEFIKQ IPEVTCSKIL PSLVVKSRTI 240
  241 QLHPDGEMGE KFYSIDGEEY DARPIKVSVV PNAIKVFC

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	278	0.99