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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32968037, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHQAVAF QFTVTPDGID LRMSHEALRQ IYLSGLHSWK KKFIRFKNGI ITGVYPASPS  60
   61 SWLIVVVGVM STMYAKIDPS LGIIAKINRT LDTTGCMSSQ TKKVVSGVIF GTGLWAALIV 120
  121 TMRYSLKVLL SYHGWMFTQH GSLSRTTKIW MFMVKIFSGR KPMLYSFQTS LPRLPVPAVQ 180
  181 DTVNRYLESV KPLMKEGDFT RMTALAQDFA VNLGPRLQWY LKLKSWWATN YVSDWWEEYI 240
  241 YLRGRGPLMV NSNYFAMDLL YIKPTHIQAA RAGNGIHAIL LYRRKLDREE IKPILLLGST 300
  301 IPLCSAQWER MFNTSRIPGE ETDTIQHLRD SKHIVVFHRG RYFKVWLYHD GRLLRPREIE 360
  361 QQVQRILEDP SEPQPGEAKL AALTAADRVP WARCRQAYFG HGKNKQSLDA IEKAAFFVTL 420
  421 DETEQGYREE DPETSMDSYA KSLLHGRCFD RWFDKSFTFI IFKNGKIGIN AEHSWADAPI 480
  481 MGHLWEYVMA TDSFQLGYTE DGHCKGDTNP NIPYPTRLQW DIPEECQEVI ETSLSSANLL 540
  541 ANDVDFHSFP FRTFGKGLIK KCKTSPDAFV QLSLQLAHYK DMGKFSLTYE ASMTRLFREG 600
  601 RTETVRSCTT ESCNFVLAMM DPTQTAEQKL KLFKIASEKH QLLYRLAMTG AGIDRHLFCL 660
  661 YVVSKYLAVD SPFLKEVLSE PWRLSTSQTP PQQVELFNLD RNPDYVSSGG GFGPVADDGY 720
  721 GVSYILVGED LINFHISSKF SCPETDSHRF GKNLREAMTD IISLFGFSPN SRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle