YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17944987
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWINWHWRH EERHEAVYRK YFPKIADKRS LSEITRNFAL ILVNQHFTMA PPRPYVPNII  60
   61 EVGGMHVDQQ PKALPQDLED FIQGAGEHGV IYFSLGTNVR SRNLSKDRRK ILIDTFASLP 120
  121 QRILWKFDAD ELSDVPSNVL ISPWFPQQDI LAHPNVKLFI THGGLQSTVE CIHRGVPMLG 180
  181 LPFFYDQFRN MEHIKAQGIG LVLNYRDMTS DEFKDTIHQL LTEKSFGVKA KRTADRYRDQ 240
  241 PMNPLDTAIW WTHYVLRHKG APHMRVAGRN LDFITYHSLD VLGTFLLAVW AILSIVVLCA 300
  301 IKLLRAILKS KKGNISPKQK IN

Type	Start	End	Confidence
Non-Cytoplasmic	1	280	0.96
Transmembrane Helix	281	304	0.88
Cytoplasmic	305	322	0.93