YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2C10_ORYSJ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGRPSRPLA SSSSSSSSRV FSFFLAPRVF LFLVVVVVVV FLPGRSSCWW LEGTEELEEE  60
   61 MGFAGDCSPV SGGGLSENGK FSYGYASAPG KRASMEDFYE TRIDGVDGET IGLFGVFDGH 120
  121 GGARAAEYVK QHLFSNLIKH PKFISDIKSA IAETYNHTDS EFLKAESSHT RDAGSTASTA 180
  181 ILVGDRLLVA NVGDSRAVVC RGGDAIAVSR DHKPDQSDER QRIEDAGGFV MWAGTWRVGG 240
  241 VLAVSRAFGD KLLKQYVVAD PEIKEEIVDS SLEFLILASD GLWDVVSNKE AVDMVRPIQD 300
  301 PEQAAKRLLQ EAYQRGSADN ITVVIVRFLE GTTTGGGPSR EAASDQNS

Type	Start	End	Confidence
Signal Peptide	1	48	0.72
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	348	0.98