YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79323249, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVVFLSLIV VIWVASFFKI FFRATSISRA TILDDGKKNV MFVIAHPDDE SMFFSPTINY  60
   61 FTSTACNLHI LCFSTGNADG MGSIRDQELH RACAVLKVPL QQLKILDHPN LQDGFGQLWS 120
  121 HDLLTEIIEE EVTNHYIHTI ITFDNYGVWG HCNHRDVHRG VLKFLQTNSG RNVKAWELVS 180
  181 LNIFRKYCGP VDIWLSILSA KRHPSKVIII NKQPWKSFKA MAQHLSQWVW FRKLFVLFSS 240
  241 YTYVNTLDRI NPESNELL

Type	Start	End	Confidence
Signal Peptide	1	16	0.45
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	258	0.64