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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52077288, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVALLSPA AAAAVVTEGE EKPPLEEVEV EVEVVVRAIV ADGDGREANA AAPGANWCGE  60
   61 EEVPAHAAEG GTVAAMVDEN AAAPAAEGDT VAAAKGEAPA AEGDMVVAAK GAAHAAAEGD 120
  121 TVAAAAVAGE NEAAHAPAAG GNTVAAAADV KGEALQAIPV ADEAAAVAEG VNAIAAAERE 180
  181 EDDEGVKWLK HYSSLQSILT VGDGDFSFSL ALATAFGSGD NLVATSLDTI EDLRGKYSKA 240
  241 ESNIMELKRM GATVLHGIDA KRMKDHTNLK LRRFDRIIFN FPHAGFKGKE DDLHMINLHR 300
  301 ELVWGFFQNA RHLLRPYGEI HVSHKIGLPY DRWCIEHLAY ESSLTMIAKV DFRKEDYPGY 360
  361 NQKRGDSAKC DQPFELGACC TFMFMRDLTR LKRARRNRIN ASSLGIQAQH DMPFHPRPLV 420
  421 PAYPQPHFPS QVNAAHRQVP PEHYPLGIAH GQEPGFLDNF GGIERYPYQR GAIGTVIGMP 480
  481 GTPSPMRGIT RSSFPAPQEQ PWRQERYIMD PEVRDDHYHF AREYPRNLQE YEMERQVMPG 540
  541 GTRLRYVDFL ENRYEESVRR QEHLRRLIAE YGGYD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle