YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25272006
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILLALSFL ALFQMPRLSS ALPGGLLDAE LRQSLGLESL KLEDHEIPSA AVVPADELAP  60
   61 PILSRNRSAV PASHPNGSAL RGVRKLLVGT ADRSCALQDL SLTQDPVSST SGTPTFYVQI 120
  121 VNMCGACAMA DIHVACGAWA SATPVDPSVF TRLGYNDCLV NNGQPLSSHG TVSFQYSSPA 180
  181 MYFMSIAIAT SECSR

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	195	0.99