YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30424445
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIHSIFLLM VSITLVIAEE SDNVLFDKRA PTGHQEMQGK QNSASLNSEN FGIFKRALMG  60
   61 FQGVRGKKNS IINDVKNELF PEDINKRAPM GFQGMRGKKA SFDDEYYKRA PMGFQGMRGK 120
  121 KSLEEILDEI KKKTTRFQDS RSKDVYLIDY PEDYGKRVLS MDGYQNILDK KDELLGEWEK 180
  181 RAPMGFYGTR GKKIILDALE ELDKRGVMDF QIGLQRKKDT TFDDYLDYAI NPFDYEKRST 240
  241 DFQDVESGSE SFKRARMGFH GMRGKRDAAG IYGSNSSTVG TIFGYQGTYV NLVIVKVFTI 300
  301 K

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	301	0.99