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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|222635400, gi...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAAVTSLSH PSTASSAKFD GRRSEERRKK GLIVAAASSA LTSIPLSLLA MSRNLESPVQ  60
   61 TQMAVSALNR ALSSEYPSKS RSEGRASGWK RIFVQTDTGC VLAVQLDRGD NAHTVKRKLQ 120
  121 LALNVPTEES SLTFGDRVLK NDLSTIRNDS PLLLTKTFMH RSSSTPCLSP TGKDIQQQRD 180
  181 RGGPIELLVC PSRCSRTKQL VKDVARAIRN GVDPIPVNSG LGGAYYFRNS KGENAAIVKP 240
  241 NDEEPFAPNN PKGFTGKALG QPGLKRSVRV GETGFREVAA YLLDYDNSAN VPPTVLVKIS 300
  301 HPVFNVNECV SSANMKASKD YPGAVSKIAS FQQFIPHDFD ASDHGTSSFP VSAVHRIGIL 360
  361 DIRIFNTDRH AGNLLVRKLT GPGKFGNQTE LIPIDHGLCL PECLEDPYFE WIHWPQASIP 420
  421 FSDDELDYIA NLDPMKDADM LRMELPMIHE ACLRVLILST IFLKEATSFG LCLAEIGEMM 480
  481 SREFTGMEDQ PSELEVVCME ARRLAIEREE SSTEIDSGDE DAIQFELDCE DDHEMLKAQP 540
  541 AYHFELKGGS SRNPLSKLDE AIEEEEDDIE EEESNAEKLG YPKAINKWLP NISKLSTSLN 600
  601 GVRLGDKIQC QLPAAPKIMD PVKIFEGNSN HSGSQVGNWR SANEQLPTSA SFVKLADMGS 660
  661 ETWALFLEKF QELLPEAFRS RKCGAAGQRA RQRLGTSCQF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle