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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27262376
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNGTDSSKS CSKSACAVAP EQTTETVQKD PKRPIGSSVR VTLPVTGMSC AACSSRIERS  60
   61 LRKIPGVLEC NVNLALEKAT VEFNPRQTGI DAFVQKINDL GFGVPTERLE LSVGGMSCAA 120
  121 CAARIEKKLN RLPGIITASV NLATEKAVIQ YYPGELGNAE IINAILTLGF QARLVENAEG 180
  181 TDREQAEREQ RLRRQWLLFG LSALLSFPML LIMIAEMSGF VLPYWLTSQY TQFLLATPVQ 240
  241 FGVGWQFYRG AYKALKNSSA NMDVLVALGT SAAYIYSVYF TFFSPHVHHV YYETGSILIT 300
  301 LILLGKTLEA VAKGRTSEAI KKLMGLQAKT ARVVRDGREM DIPLELVMAG DRVIVRPGEK 360
  361 IPVDGVVEEG LSAVDESMLT GESLPVDKKP GDAVIGATIN KHGSFKFRAT KVGKDTALAQ 420
  421 IIRVVEEAQG SKAPIQRMAD KISGYFVPAV VTLAVVTFLL WYFLLEPGNF TRALLNFTAV 480
  481 LVIACPCALG LATPTSIMVG TGKGAENGIL FKGGEHLEKA HKISAVILDK TGTITKGKPE 540
  541 LTDFIVLGDF IGQEATLLQW AGQAEKSSEH PLAEAIVKNA QQATPSLADA ESFQAIPGRG 600
  601 VKATVDGHSI LLGTRKLLTE NNVPFAVFEA IAETLESEGK TAMFMAVDHS AAAVIAVADT 660
  661 IKETSAEAVS ALKSMGIQVW MITGDNRRTA EAIAQQAGID HVIAEVLPED KALNVKKRKE 720
  721 EGHVVAMVGD GINDAPALAT ADVGMAIGTG TDVAMEAADV TLMSGDLRAI VAAIRLSRAT 780
  781 MSNIRQNLFW AMIYNSLGIP VAAAGLLNPV IAGGAMAFSS VSVVANALRL RGVRPYDRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle