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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|171680763
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQPLPSND NDVSIATIAP KQEAPTSSKK LPPPEKPSDV RRRSHVILSF WLIVLLLGLP  60
   61 IWWKTTTIYR ADLPLEDMLE WADGKACRPV FPLRISIQAT SLQDQEAQNL LRLTQHALDD 120
  121 LNDFAGHHLR LQMGDEKQDS ADNGSALTIR LTPGEGTTAT LDPYEPILDI TYPQNTIPSP 180
  181 TASSSALATY IASQLRTTFA EEQATISYLL STNSMPSEHR PLGLSPETAE ALAKRTTRSL 240
  241 KYAPTYHLTF SLFTSGPLPS SWDIETAIEE YMKPVLDVLS PIHNFTIDTQ VQLYASPGVQ 300
  301 NQVLNKEDLS SFINAAEWPL SPSIGGAPTI NFIVFVGNQT IASPSQEAAP TSHSWLIPQW 360
  361 GTVFLLSLPG DTTHVAATTL KQPLLTFTSH LLSLTGTPES GSLPLRLSTL ARIRSADLLL 420
  421 RASSTLGSLA RLAMALPSIS IPSSVADGVT KTMSHLRLAC DNLGGTEGLA HARIAEVEAE 480
  481 RAFFEKSMVG QLYFPDEHKI AVYLPLLGPV AVPLVMGLIN EIKAWRKRRR ERAEKGAEKK 540
  541 GE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle