YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125808731, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLRITIALL LACVAGALAQ NDGRYRPPPA AVRATAGDGR YKGGNDGRYR GGNDGRYSGA  60
   61 SDGRYVHVDN KYEHDDRAGG AYTGDRNRYV GDKNTGGGAG RAGAGAGAGS GSGARPGGGA 120
  121 AGAAGAGATK KPQPRPTIPP PPAVVDVTAN LPKGRGTGEG GNGWAIIRLE DDVEQDGYHY 180
  181 LYETENGILA EESGRIEKLA EDDGLRSKGF YEYTGDDGIL YRVDYTADDN GFVPSAAHLP 240
  241 TPPPPPPYVA KLLAYLEENA KKKK

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	264	0.99