YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54636267, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAILNHAIR RQFGATAARN MSGTAAVAGE HSGGYKVWKR LSFFVAVPAV GLCMLNAYLK  60
   61 HQEEHDHPRQ EFVKYDYLRR REKRFPWGEG NKSLFHNPHV NPLPDGYEH

Type	Start	End	Confidence
Cytoplasmic	1	40	0.41
Transmembrane Helix	41	59	0.67
Non-Cytoplasmic	60	109	0.65