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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54637170, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQPPWPSPRG NCRLIALMIL ALLAVLSMVT EVAALPFLFT RFRPQINWTQ PRMERWVIEE  60
   61 QPRSIEPHLD LVNHPNRTHS AATSGDGSDA EFLQRLVSIR HNQTSKSRML WYDVGSGDGL 120
  121 VYPPFVDKAL KLLNLKQVAF EIENSVMSKV TCTACRAGSG MLQHQIQSGK TDAELIRMIS 180
  181 DYCTNLNIQS ARVCQGVAQL FGSELIYVIK RVNLSPDELC SFIIGDGCGD VYNPYHEWEV 240
  241 IFPPVPKPPR LADLPIPLEA APFFKVLHIS DTHYDPHYAE GSNADCNEPL CCRLSSGRPA 300
  301 TPNAAAGKWG DYRKCDTPKR TVDHMLEHIA ETHKDIDYIL WTGDLPPHDV WNQTKEENLA 360
  361 IIKETVKQMV EKFPGIPIFP ALGNHESAPV NSFPPPYVNQ VDISISWLYD ELDVQWRRWL 420
  421 PQSVTHTVRR GAFYSVLVRP GFRIISLNMN YCNNKNWWLL LNSTDPATEL QWFIYELQSA 480
  481 EFSNEKVHVI GHIPPGHSDC LKVWSRNFYK IISRYESTIT AQFYGHTHYD EFEMFYDPHD 540
  541 LNHPNSIAYI GPSVSPYYDL NPGYRVYYVD GDHDSTTRLV IDHESWIMNL KEANLYGYPI 600
  601 WYKLYTARAA YNMKALRPSD WNNLLNELTN NQELFELYYK YYWKNSPARP TCDAECKKRL 660
  661 ICDCKSGRSH DRKHFCADVE SKIDEESSKS WKSWFYRGLT NSAEDRTEIP ASGEQTTTEF 720
  721 WAPIDLVVVN IGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle