YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125772558, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVGRGHDMPM VFHGGYNETI LFKFWQCDTR LALAFSCLSI FILAILYEAL KFFRDWLFRK  60
   61 RKRRIQGGYD NYSPSRNRRI QTYVYRPPQV RRPVQAQSPA PTAAPTSITY FSDANAHTHI 120
  121 RRPGPPGPPG PSRLLAAVES QDTGESFTCD FYLSPLHIAQ TFLHMLQVLI SFLLMLVFMS 180
  181 FNVWLCLAVL LGAGMGYFLF FPLSTSVQEH CN

Type	Start	End	Confidence
Non-Cytoplasmic	1	30	0.88
Transmembrane Helix	31	53	0.92
Cytoplasmic	54	167	0.89
Transmembrane Helix	168	200	0.79
Non-Cytoplasmic	201	212	0.72