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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125772871|ref...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEFRYLSIT DLSFNLPIAP LHAAAKTEEP GLSDNPTTEL NIPYTVFEIL VAIVSIIGNV  60
   61 LVIIVFRRER KLRRRTNYYI VSLAMADFLV GSLGVPFAIL ASIGLPHNLH ACLFTVSLLV 120
  121 VLCTISIFCL VAVSVDRYWA ILYPMAYSRN VRTRTAIFII SMCWVAGTIV GFLPLFGWHA 180
  181 DVAHNQECLF VEVMDYDYLV FLYFATIITP ALLMLAFYTH IYRVIIKQVR QIVTMNPASD 240
  241 LSRRSSTAPM QVMPGRGGHA GTMLRVLGAA RKRDVKATQN LSIIVLFFMI CWIPLYTINC 300
  301 IKAFCPDCYV HPKLTLFCII LSHLNSAVNP VLYAYHLKDF RAALKNLLLK MMGVDIDQQA 360
  361 EATHRFSLAS QHRLQSMDSN MRSTQPRLYV GEYSPIWLRQ QQEALKNSQL LPKCGVVSPC 420
  421 FNNINQTVAA VASVTTDMER EMWNIMEASS GAELGEISYE FPIPAGLSPK RESDHDSSIS 480
  481 IPPRTSPDKP ASLQPATHGM HQRCDSVYSY DNHNYSSSQD EDDKGLVDED GDDIDFEDVF 540
  541 DPGTPNQTGV DPAELRRSLA IVMREKLRSD DTDYQNQPSN IHELPYDPDL ALQQEGAKGR 600
  601 PCSTQTSPTN GPLPPLLRAK LFAGNSNSLP GTSHKEANTP TPGVYVIDSE ASPGSTGHKP 660
  661 KYRKGTALTR NSLKKSRSCT CSNNPKGRSQ GDGNGEVALS LNNNNNLSDP QESPLNHHQE 720
  721 SFFSPLRSVS SLMHHSNLFH LFQPHATRTT STSTNSPGPS TPTPAHLLAR DEAASASSPS 780
  781 LATASAES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle