YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194112167, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQIRTVVT STFLGLFTAA ATILILYFVM TGKGERVSVG WFLTSSNPYM WACLGIGLAV  60
   61 SLSVVGAALG IHTTGTSIVG GGVKAPRIKT KNLISVIFCE AVAIYGLITA IVLSGQLEQF 120
  121 QMETALNNVA IMNNNWFSGY LIFGAGLAVG LVNLFCGIAV GIVGSGAALS DAANAALFVK 180
  181 ILIVEIFGSA IGLFGLIVGI YMTSKSKMGD KE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.94
Transmembrane Helix	8	30	0.92
Non-Cytoplasmic	31	49	0.90
Transmembrane Helix	50	72	0.94
Cytoplasmic	73	92	0.85
Transmembrane Helix	93	113	0.95
Non-Cytoplasmic	114	140	0.86
Transmembrane Helix	141	164	0.91
Cytoplasmic	165	176	0.75
Transmembrane Helix	177	200	0.89
Non-Cytoplasmic	201	212	0.85