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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54639790, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNLDGAEEA SPPPPESSQL LLDEEKGTPA PPASHLEPPF TTPLAPFDME LMQRIGLSDK  60
   61 LNGSGSLWEG RNRGRGAADP TTDFMDQERD AASGENRKSS SESLSDKRAR FAASNASTLQ 120
  121 LPDGAAGPLA NGKKKSSEPR NQNHLSSPLL PMTEPTLGNN GYDERECSCP REFYQREEIN 180
  181 TSLFFEDCTR SIDFVLAYRI NAHEPTEAEN TEKRRVFEAN LVSQGLEVET SQKDQICFVK 240
  241 IHAPLEVLRR YAEILKLRMP MKEIPGMSVV NRSTKSIFSS LKTVCQFFLR NIHVDEHIFP 300
  301 KRAHRFTAIY SRDKEYLFDI RQDCFFTTAV RSRIVEFILD RQRFPTKNQH DMAFGIERLI 360
  361 AEGGYCAAYP LHDGEITESG TMRALLYKHW ASVKKWYRYQ PLDDIKEYFG VKIGLYFAWL 420
  421 GYYTYMLLLA SIVGVICFLY SWLSLKNYVP VKDICLRPNT NITMCPLCDW CNFWDLKETC 480
  481 NYAKVTYLID NPSTVFFAVF MSFWATLFLE LWKRYSAEIT HRWDLTGFDV HEEHPRPQYL 540
  541 AKLEHIPPTR VDYVTNVKEP TVPFWRMKLP ATVFSFSVVL LLIALAFVAL LAVVVYRMSM 600
  601 LAALKVGASP LTTSSAIVLA TASAAFVNLC LLYILNYMYS HLAEYLTELE MWRTQTQFDD 660
  661 SLTLKIYLLQ FVNYYASIFY IAFFKGKFVG HPGEYNKLFD YRQEECSSGG CLTELCIQLA 720
  721 IIMVGKQAFN TILEVYLPMF WRKVLAIQVG LSRLFNNTPN PDKTKDERWM RDFKLLDWGA 780
  781 RGLFPEYLEM VLQYGFVTIF VAAFPLAPFF ALLNNILEMR LDAKKLLTHH KRPVSQRVRD 840
  841 IGVWYRILDC IGKLSVITNG FIIAFTSDMI PRLVYRNYVS KDGTLNGYLD FTLSEFKVSD 900
  901 SPTLNSLAGD LSNITSCKYT DFRLPPSSPD KYNLSSMFYI ILACRLGFVV VFENFVALVM 960
  961 ILVRWCIPDM SVELRDQIRR EVYVTNEIII EQEAHRARFE RAKRSSSVLQ TSPDQEVDAS1020
 1021 SIQEPNAKFI SIEKLLSENL TQVELDAIIH LSDPLTGIAG AN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle