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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125981951|ref...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSGHNRYP CSSATAALAF CVCLALGAGP TQGDDSAEAI ASSSRKWLCS QTDICTSEDD  60
   61 MEDGAQYLEE RFESQRDCRL SCGKYGSIWP MPTGEECSLS HERVHFDPWK VRFHVVAPSE 120
  121 VTTQFLRETN RLFVSNLLKE CTRNCTLASS KQILVRATVS SDSLVLDWRT DESYSMVLRT 180
  181 TETATFVDIQ AATVYGARHS FETLSNLVAG SVTNGLLLVS AARISDRPAF PHRGVLLDTS 240
  241 RNFIPLRYLR STLDAMAASK MNVLHWHVVD THSFPLEITR VPEMQRYGAY SASQTYSRTD 300
  301 SVNLVKYARL RGIRILIEID GPSHAGNGWQ WGPAAGLGNM SVCLNQSPWR RFCVQPPCGQ 360
  361 LNPLNDHMYA VLKEILEDVA EVGAPEETVH MGGDEVFLPC WNNTEEIVTK MRAQGYDLSE 420
  421 QSFLRLWSQF HQRNLNAWDD INERMYPSIK EPKPVILWSS HLTVPKYIET FLPKERFIIQ 480
  481 TWVDSQDPLN RDLLQRGYRL IVSTKNAWYL DHGFWGSTSY YNWRTVYASG MPMGNHGNQV 540
  541 LGGEVCMWSE FVDHNSLESR IWPRAGAAAE RLWSNPKSSA LVAQRRFYRY RERLLARGIH 600
  601 ADAVIPRWCV LHEGRCL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle