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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125982057, gi...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNLVEQEVPR RFWLGYAQRL LWNVEGERRS LSLLSNDTLR LTFGQGLLAS ATMSLLALAQ  60
   61 ASASTSTSSS SDTELDAQID FSTMLMQRQR ELSGWFGCGS KMQPDQVEDQ GYYLEQFVLG 120
  121 VLDFSSQYGI EYSISYTAAN VIGRPSKFPN YGDYPETFTM RTYGDWWQLA PSATREIQPQ 180
  181 NLPKLATHDY IVVYFEDYVV PTEVAIFETF NPGAVIRIWA YGLTKHWTCL WEALDTDLTA 240
  241 PTPRNSRRFA PTLKKTTMIT KTIRIDFNHS RLNYYTEIDA IMLCGRTVSG RLIQSILGEQ 300
  301 ARATKSLSPL SKMASGQMAG SITCKLQSLE FKPNFREKSD TSLHEFISND LGKFMMDNRL 360
  361 EDPLTSVSAP AAEAVPPGMC VTDLPFEIIL KILSYLDLKS LFRVGRVSRT FYDISTHPLL 420
  421 YAELNLKPYW LVASSELLCT LARRATMLRK LDLSWCGGSN EISPTEFKKF LTQRGDNLTH 480
  481 LRLNSCKFLN ASCIENVGIV CDNLIELSLR NCATDPPLLN FSCLANLKNL ERLDLFQTAF 540
  541 DTELLLSMLE GNRKLKHLNL AFCGVSVNMD DVADHLATYN TQLVSLDLWK AHFLSARGLL 600
  601 AISRCSQLEE LDLGWCLREA SLGDGLFQLL SNCPKLRKLF LSAVRGTTER DLIHIATLGK 660
  661 NLEQLDLMGI LNITHERIYD ILVHCPKLQL LDLSFCENIM EREFDVLAEW SRQFKVDIKS 720
  721 SR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle