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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54643894, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLLKKCLR KKAPEMKPGA ILDAVISQSS ATACKCLLYK LADYKRGGDL IDAINSGGLV  60
   61 AVEQLIREQF GVFMYNDGKG QVINRAEFLR WKYRDHTEVT IPIEASLSIH DPLGKWEDHK 120
  121 ACWQMQYRGA LGESLLHVLI ICDSKIHTKL ARVLLRVFPN LALDVMEGEE YLGASALHLS 180
  181 IAYSNNELVA DLIEAGADIN QRAIGSFFLP RDQQRMNPAK STDYEGLAYM GEYPLAWAAC 240
  241 CANESVYNLL VDCGADPDAQ DSFGNMILHM VVVCDKLDMF GYALRHPKTP AKNGIVNQTG 300
  301 LTPLTLACKL GRAEVFREML ELSAREFWRY SNITCSGYPL NALDTLLPDG RTNWNSALFI 360
  361 ILNGTKPEHL DMLDGGIIQR LLEEKWKTFA QNQFLKRLLI LSTHLLCLSV SVYLRPAHEG 420
  421 EPEEESESAL AAAAAALQDR AEPGGTAEAS DDYNAQTVAR YCAELATIAG VLSYVVFQQG 480
  481 DEIKNQGLSA FLKQLSHAPA KAIFLFSNLL ILACIPFRLI GDTDTEEAIL IFAVPGSWFL 540
  541 LMFFAGAIRL TGPFVTMIYS MITGDMFTFG IIYCIVLCGF SQAFYFLYKG HPQVQSTMFN 600
  601 TYTSTWMALF QTTLGDYNYP DLNQTTYPNL SKTVFVIFMI FVPILLLNML IAMMGNTYVT 660
  661 VIEQSEKEWM KQWAKIVVTL ERAVPQADAK GYLEAYSIPL GPSDDSGFEV RGVMVIKSKS 720
  721 KTRAKQRKGA VSNWKRVGRV TLTALKKRGM TGEEMRRLMW GRASISSPVK VTKQKLKDPY 780
  781 NTMHTDSDFT NAMDMLTFAN NPASSNGVQL RTAASLGGAK ESAPPVPDPF RELIMMSDER 840
  841 PETHDPHYFA GLQQLANKAF DLVEQTMKTQ PHPHSQSQPQ IDMNVPSVAP IAPIAAPVPV 900
  901 AAAAAVTSLP ADAAAAMPAV AIPLPMTTLG NLFQDPKDVV DPKKLEEFMA MLAEVETEES 960
  961 DSGGPILGKL SLAKRTHNAL SKADIRREHD TMGFDGNSHG QFQGMSSVWA PPGLDVSTGF1020
 1021 HFDEAVAEEV LTIEQEAEVE TEDGNGGQES EDLPTTDEVH ATMKQFHLRK CQPSQDEAAR1080
 1081 RAKSARVRRR NKVSPEQSEE EERRQQRGRT AHGRKMPSPP DPLEPWSTRE LQDINKILAR1140
 1141 K

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