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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54645085, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNRTPGNK REEELPPASS DSEEEDEEAL QAALRDIVSI PDVDAGDFKN ERRVETERTW  60
   61 SEELKQGRKK ERQKPAQRQE KKEKKPQHGP EMGETSDKTM EGRDLPKTWS AEFKESMKSW 120
  121 YADLRESQKP KRSHSQTRKR SRHSSEVEME ETAVARGKSP ERESKKKEST KKPPTKELET 180
  181 ERSSAKKVKP KMVSFVEPDS LIKLETESDG LDEPLDEEPE PSTSMEPSPY ARAQSHDSVE 240
  241 ANPLSVPSIE SGMGLINLLA VPFQRPLSYG SPISASKVVD KAGAGEEKAP ASPEIPSVGP 300
  301 RNVTPKAKPA SDAEEERDGK ESQVESKTSL AHAESMKTVT ITGHRHITTQ WRDHCHLEVQ 360
  361 PEGIDKPARR KLIVACVLCL SFMILEVIGG VLSNSLAIAT DAAHLLTDLA GFLISLFALY 420
  421 ISARPNTQRM NFGWYRAEVI GAMISVYFIW VITGILVWLA IQRLWVGEHN VDPKIMLITS 480
  481 AVAILFNVIM AFQLHHGHGH FEPSEVVRQT RILHDELPKK ELQLVESSVS VVHVQPPKEN 540
  541 INVRAAMIHV IGDMIQSVGV FVAALIIFFR PEWSFVDAIC TFLFSIIVVL VTIRILRDVL 600
  601 MVLMEATPDY MDYDEVQRAF LSIEGVEHVH NLRIWALSIN KVALSAHLAI KKDADPQSIL 660
  661 EEATKMIHKR YRFFETTIQI EEYTPGMENC EQCIKPGMRL SRGDSRTIHA MEEGAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle