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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8132534
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAASAPQ QLSDEELFSQ LRRYGLSPGP VTESTRPVYL KKLKKLREEE QQQHRSGGRG  60
   61 NKTRNSNNNN TAAATVAAAG PAAAAAAGMG VRPVSGDLSY LRTPGGLCRI SASGPESLLG 120
  121 GPGGASAAPA AGSKVLLGFS SDESDVEASP RDQAGGGGRK DRASLQYRGL KAPPAPLAAS 180
  181 EVTNSNSAER RKPHSWWGAR RPAGPELQTP PGKDGAVEDE EGEGEDGEER DPETEEPLWA 240
  241 SRTVNGSRLV PYSCRENYSD SEEEDDDDVA SSRQVLKDDS LSRHRPRRTH SKPLPPLTAK 300
  301 SAGGRLETSV QGGGGLAMND RAAAAGSLDR SRNLEEAAAA EQGGGCDQVD SSPVPRYRVN 360
  361 AKKLTPLLPP PLTDMDSTLD SSTGSLLKTN NHIGGGAFSV DSPRIYSNSL PPSAAVAASS 420
  421 SLRINHANHT GSNHTYLKNT YNKPKLSEPE EELLQQFKRE EVSPTGSFSA HYLSMFLLTA 480
  481 ACLFFLILGL TYLGMRGTGV SEDGELSKNP FGETFGKIQE SEKTLMMNTL YKLHDRLAQL 540
  541 AGDHECGSSS QRTLSVQEAA AYLKDLGPEY EGIFNTSLQW ILENGKDVGI RCVGFGPEEE 600
  601 LTNITDVQFL QSTRPLMSFW CRFRRAFVTV THRLLLLCLG VVMVCVVLRY MKYRWTKEEE 660
  661 ETRQMYDMVV KIIDVLRSHN EACQENKDLQ PYMPIPHVRD SLIQPHDRKK MKKVWDRAVD 720
  721 FLAANESRVR TETRRIGGAD FLVWRWIQPS ASCDKILVIP SKVWQGQAFH LDRRNSPPNS 780
  781 LTPCLKIRNM FDPVMEIGDQ WHLAIQEAIL EKCSDNDGIV HIAVDKNSRE GCVYVKCLSP 840
  841 EYAGKAFKAL HGSWFDGKLV TVKYLRLDRY HHRFPQALTS NTPLKPSNKH MNSMSHLRLR 900
  901 TGLTNSQGSS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle