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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19528509
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRGVTQINF FEKEKSATST DRNDLGTNVL DNDCYGHWKY PSNCSPQEHT CEYYASWETV  60
   61 GKGDEMRWHI ETSNTQTWTG IGFSDDQRMS QTDAIIGWVD GRSGRPFLMD TWVLGYAPPK 120
  121 LDDRQDIYNA SGRIEKGVTI LEFNRKRVSN DEQDLSFTDD HCLYLFFPVL GGAFNVVNKK 180
  181 IRKHEQVPPI SSQRVCIKSC GKELESVFVG TSTPAPSRLV YAVAVKLMNL GESYEAPKPG 240
  241 TVEFNNLAAT ISDSFNGILS PLTGYYKTEI LGFEKEGSTM VAKVQAMFDK ADVEKKHALE 300
  301 TNEVDKTSEA AAQKNADVIR SALKDQVATG RVGSLTVDRQ FLDFEALEYK SSSEPNAKET 360
  361 LLSFFDLSET RLYIVLGLIA ALVLIALIQA FCTIWKTSRK SKNTKEKLIQ NSPWKEFASN 420
  421 TNYAFDPYGE TEEKNITNSS SGKEKARNRH QSTTSSQQTT LPMSHSPTSK SQMYYESPNG 480
  481 QGKSSNGNGS RGNGRATQES SVGGAPYSRS SYAERAYSLP RQAHQYQQSP ASMQPSGYYT 540
  541 HDRRAARQGS RDRERERERE EERRQRQDRD RDSGYDRSRD DPRQNGGSDT PDFYFMPSQR 600
  601 KYSGEVVRVY VDYNKDPKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle