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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27543472
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKPRIVII GAGMAGLPAA NKLYTASNNS FDLSVVEGGS RIGGRINTSE FSSEKIEMGA  60
   61 TWIHGIGGSP IYKIAEETGS LVSEEPWECM DSTVDKARTF AEGGFEIEPP IVEPVSGLFN 120
  121 ALMELAQGKD IENDDGGDLG EIYEIATRFY SSVNGLNGSS VGSFLRSGFE AYWASVSKGG 180
  181 NGVKEYGTWS RRSLEEAIFT MFSNTQRTYT SADDLYTLDY AAESEYQMFP GEEITIAKGY 240
  241 LSVIHHLASV LPQGVVELNR RVTKIEWESN EEDPVKLHFS DGSVVFADHV IVTVSLGVLK 300
  301 AGIESDGGLF SPPLPEFKSD AIKRLGYGVV NKLFVEVSQR RFPSLQLVFE KEDSEYRFVK 360
  361 IPWWMRRTAT MAPIHSNSKV LLSWFAGKEA LELEKLPDEE IIDGVLTTVS CLTGKKVKKD 420
  421 NGKAPKTLAN GSLREDDGEE LVKITKVLTS KWGGDPLFRG SYSYVAVGSS GDDLDAMAEP 480
  481 LPQINKKSGQ VNGHGQAKVR ELQVMFAGEA THRTHYSTTH GAYYSGLREA NRLLKHYKCD 540
  541 F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle