YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC11_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMGFLFLFC YLLAFLGYSP VDAAVKKYQF DVQVKNISRI CNAKPIVTVN GMFPGPTVYA  60
   61 REGDRVIINV TNHVQYNMSI HWHGLKQYRN GWADGPAYIT QCPIQTGQSY LYDFNVTGQR 120
  121 GTLWWHAHIL WLRATVYGAI VILPAPGKPY PFPQPYQESN IILGEWWNKD VETAVNQANQ 180
  181 LGAPPPMSDA HTINGKPGPL FPCSEKHTFV IEAEAGKTYL LRIINAALND ELFFGIAGHN 240
  241 MTVVEIDAVY TKPFTTKAIL LGPGQTTNVL VKTDRSPNRY FMAASPFMDA PVSVDNKTVT 300
  301 AILQYKGVPN TVLPILPKLP LPNDTSFALD YNGKLKSLNT PNFPALVPLK VDRRLFYTIG 360
  361 LGINACPTCV NGTNLAASIN NITFIMPKTA LLKAHYSNIS GVFRTDFPDR PPKAFNYTGV 420
  421 PLTANLGTST GTRLSRVKFN TTIELVLQDT NLLTVESHPF HLHGYNFFVV GTGVGNFDPK 480
  481 KDPAKFNLVD PPERNTVGVP TGGWAAIRFR ADNPGVWFMH CHLEVHTMWG LKMAFVVENG 540
  541 ETPELSVLPP PKDYPSC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle