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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27819920
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATLQFLDAIS WESSMEMRLN AASIWLLILS YGATIAQGER TRDKMYEPIG GASCFRRLNG  60
   61 THQTGCSSTY SGSVGVLHLI NVEADLEFLL SSPPSPPYAP MIPPHLFTRN NLMRLKEAGP 120
  121 KNISVVLLIN RTNQMKQFSH ELNCPNQYSG LNSTSETCDA SNPAKNWNPW GTGLLHEDFP 180
  181 FPIYYIADLD QVTKLEKCFQ DFNNHNYETH ALRSLCAVEV KSFMSAAVNT EVCMRRTNFI 240
  241 NNLGGSKYCD PLEGRNVYAT LYPRKPAIEN NLETVHTNEK FILVTCRLDT TTMFDGVGLG 300
  301 AMDSLMGFAV FTHVAYLLKQ LLPPQSKDLH NVLFVTFNGE SYDYIGSQRF VYDMEKLQFP 360
  361 TESTGTPPIA FDNIDFMLDI GTLDDISNIK LHALNGTTLA QQILERLNNY AKSPRYGFNL 420
  421 NIQSEMSAHL PPTSAQSFLR RDPNFNALIL NARPTNKYYH SIYDDADNVD FTYANTSKDF 480
  481 TQLTEVNDFK SLNPDSLQMK VRNVSSIVAM ALYQTITGKE YTGTKVANPL MADEFLYCFL 540
  541 QSADCPLFKA ASYPGSQLTN LPPMRYISVL GGSQESSGYT YRLLGYLLSQ LQPDIHRDNC 600
  601 TDLPLHYFAG FNNIGECRLT TQNYSHALSP AFLIDGYDWS SGMYSTWTES TWSQFSARIF 660
  661 LRPSNVHQVT TLSVGIVVLI ISFCLVYIIS SRSEVLFEDL PASNAALFG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle