YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22204206, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQWTAVAT FLYAEVFAVL LLCVPFISPK RWSKFFKSRL VTAITSYGNT AFIVIICILV  60
   61 FLLIDAFREV RKYSVAEKVD LSNNPVAIEH IHMKLFRAQR NEYIAGFALL LCLLLRRLAT 120
  121 LLSQQATLMA SHEAFQKQAE GANDAAKKYM EENEKLQEKL RQAGIEVPEV GGKAKGGVEE 180
  181 DKKNLKEEVR QLKDELDATK KALQKSDSDV KAMKKQAENL TTEYDRLLEE HARLQAKCDA 240
  241 QQDKKSD

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.56
Transmembrane Helix	7	28	0.91
Cytoplasmic	29	42	0.53
Transmembrane Helix	43	64	0.91
Non-Cytoplasmic	65	247	0.56