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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20258069
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLQDLVVTV SLLAAFNGGV EAWSPTNSYV PANVTCPNDI NLLRNATGLS QSEIDWLKKR  60
   61 DVNTREALES FLKRVTSNFT SNSSASNLID QLFSTNSSNI PKIGIAASGG GYRAMLSGAG 120
  121 MVSAMDNRTD GANEHGLGGL LQAATYLAGL SGGNWLTTTL SWNNWTSVQD IVDSQDNDSA 180
  181 IWDISHSIVS PGGINIFKTG SRWDHISDAV EDKQKAGFNV SLADVWGRAL SYQFFPTLYR 240
  241 GGVAYLWSDL RESDVFKNAE MPMPISVADG RYPGTAVIDL NSTVFEYSPF ELGSWDPSLS 300
  301 AFTDVQYLGT KVSDGKPAEE GKCIAGFDNV GFLMGTSSTL FNQFLLRIND TSIPKFIRNL 360
  361 ATHFLKDLSE DYDHIAVYAP NPFRDADYVN NNRSKSLSES EYLFLVDGGE DGQNVPLVPL 420
  421 IQQERDLDIV FALDNSADRE ENWPDGASLM HTYRRQFGFQ GQGVTFPSVP GTDTFVNLGL 480
  481 NKKPTFFGCD ARNMTDLEYI PPLIVYIPNS RHSYNGNTST FKLSYSEKER LGVIRNGFEA 540
  541 ATMNNLTADS NFAGCIGCAI MRRKQQALNL TLPKECETCF TNYCWKPTMQ NTPAKGVTAS 600
  601 NDFDNASGSA AADMAEQDAS GAASASSSSR KKNAAVSVDV NAKTLFAIIT AMTAVFQLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle