YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6179600
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSRPAPFIH RLRLLRSAVV SPSSAPLPCS RPRLAVPFAQ PPIRAPAFAA AGSPLLRPVG  60
   61 ARFSLSSNMA AAASSASSVH DFTVEDASGK DVDLSTYKGK VLLIVNVASQ CGLTNSNYTE 120
  121 LAQLYEKYKD QGFEILAFPC NQFGGQEPGT NEEIVQFACT RFKAEYPIFD KVDVNGDNVA 180
  181 PVYKFLKSSK GSLFGDNIKW NFSKFLVDKD GNVVDRYAPT TSPLSIEKDI KKLLASS

Type	Start	End	Confidence
Signal Peptide	1	35	0.82
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	237	0.97