YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16604332, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIKLKHELI IGSYKTIDGR GTNIQITGHG CLTIQQVSHV IIHNVHIHHC KPSGNTLVAS  60
   61 SPTHVGFRGV SDGDGISVSA SHHIWVDHCS LGYCADGLID VILASTAVTI SNNYFSHHDE 120
  121 VMLLGHDDRY TADKGMQVTI AFNHFGEGLV QRMPRCRHGY IHVVNNDFTA WEMYAIGGSA 180
  181 SPTINSQGNR YTAPIDPNAK EVTKRVDSNE KHWSGWNWRT EGDVMVNGAF FVPSGDGVSP 240
  241 AYARATSVQP KAAAIIDQLT VNAGVFGDPS GRNGQGGSFP GITNGGGTIT RGYSKSGPAG 300
  301 GGSGSDSDDG LFTLIFGNNS GAVALRPGQV WSILLIIILY WYIPHHTRS

Type	Start	End	Confidence
Non-Cytoplasmic	1	321	0.77
Transmembrane Helix	322	343	0.78
Cytoplasmic	344	349	0.59