YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9843639
Protein type:	Globular with Signal Peptide
Type Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLSPAT QLGSSRSALM AMSSGLFVKP TKMNHQMVRK EKIGLRIACQ ASSIPADRVP  60
   61 DMEKRKTLNL LLLGALSLPT GYMLVPYATF FVPPGTGGGG GGTPAKDALG NDVVAAEWLK 120
  121 THGPGDRTLT QGLKGDPTYL VVENDKTLAT YGINAVCTHL GCVVPWNKAE NKFLCPCHGS 180
  181 QYNAQGRVVR GPAPLSLALA HADIDEAGKV LFVPWVETDF RTGDAPWWS

Type	Start	End	Confidence
Signal Peptide	1	17	0.40
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	229	0.77