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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5679841
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLALAVAS IVLANLHLLG VHGRDLLLSC GSNATVDADG RRWIGDMAPG LNFTLSSPGI  60
   61 AASQAGSSNA NEIFGLVYHS ARFFSTASWY NFSVLPGNYC LSLHFFPYTF GNFSGNDSLF 120
  121 DVTANDFKLV SKFNVSEEIV WRSTVSNSAI NAVVKEYFLL VGSRGLQVEF DPSPGSFAFV 180
  181 NAIEVMLTPD NLFNDTVNKV GSAGNGQLPL GLSNRGLETM YRLNVGGHAL NSSSDQYLHR 240
  241 PWYTDEAFMF SANAAQIVSN TSSVSYLSNN DSSISPIDVY ETARIMSNNM VVDKRFNVSW 300
  301 RFYVHPNFDY LVRLHFCELF YDKPNQRVFK IYINNKTAAE DYDVYVRAGG INKAYHEDYF 360
  361 DNLPQQVDSL WLQLGPDSLT SASGTDPLLN GLEIFKLSRN GNLAYVLGHI DMGNQRGISK 420
  421 DRNRKILWEE VGIGSASFVT LTSVVLFAWC YIRRKRKADE KEPPPGWHPL VLHEAMKSTT 480
  481 DARAAGKSPL TRNSSSIGHR MGRRFSISEI RAATKNFDEA LLIGTGGFGK VYKGEVDEGT 540
  541 TVAIKRANPL CGQGLKEFET EIEMLSKLRH RHLVAMIGYC EEQKEMILVY EYMAKGTLRS 600
  601 HLYGSDLPPL TWKQRVDACI GAARGLHYLH TGADRGIIHR DVKTTNILLD ENFVAKIADF 660
  661 GLSKTGPTLD QTHVSTAVKG SFGYLDPEYF RRQQLTQKSD VYSFGVVLFE VACGRPVIDP 720
  721 TLPKDQINLA EWAMRWQRQR SLDAIVDPRL DGDFSSESLK KFGEIAEKCL ADDGRSRPSM 780
  781 GEVLWHLEYV LQLHEAYKRN NVDCESFGSS ELGFADMSFS LPHIREGEEE HHSKPSSIRE 840
  841 DPDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle