YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16903125
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQRHHLSL LFIMFSFVAC HSTVLLDGGG TFKDFIKQKS TDVMSIRKFG KLGDISSSLK  60
   61 TVNVNDYGAP GDGKTDDTQA FKEAWEVACS SGGAVFVVPR KNYLLKPFTF SGPCESDIEV 120
  121 QISGIIEASE NLSDYSEDLT HWLVFDSIEK LSVKGGGTID GNGNIWWQNS CKVNEKLPCK 180
  181 NAPTALTFYK CKDLTVEDLT IKNGQQMQVS FQNSENVQVS DLTVTAPGDS PNTDGIHVTN 240
  241 TQNIQISNSV IGTGDDCISI VSGSKDVLAT DIICGPGHGI SIGSLGAEGS KDFVSGITVK 300
  301 GAQLSGTTNG LRIKTWQGGS GSASNIQFQN IQMDNVANPI IIDQNYCDQE TPCEEQTSAV 360
  361 QIRNVLYQNI SGTSASDVGV QFDCSKKFPC QGIVLQNIDL KLEGGGEAKA SCNSVELSYR 420
  421 GDVNPLCP

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	428	0.99