YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57530130, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGGDGRLR TAESGGDGGA GEPAGGGMLL HVGLLALVLL AAYRLYLRWR KRSALGGAAQ  60
   61 QSQAALLPRM KRRDFSLEQL REFDGTRNPR ILLAVNGKVF DVTKGSKFYG PEGPYGIFAG 120
  121 RDASRGLATF CLDKDALRDE YDDLSDLNAV QMESVREWEM QFKEKYDYVG RLLKPGEEPS 180
  181 EYTDEEDTKD HTKQE

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.93
Transmembrane Helix	27	47	0.92
Cytoplasmic	48	195	0.99