YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57529406, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAEQVLSL EPQHELKFKG PFTDVVTTNL KLGNPTDRNV CFKVKTTAPR RYCVRPNSGI  60
   61 IDAGTSINVS VMLQPFDYDP NEKSKHKFMV QSMFAPADTS DMEAVWKEAK PEELMDSKLR 120
  121 CVFELPTEND KPHDIEINKI VSTTATKTDS SVMSKSISSS LDDTEVKKVM EEYKRLQVEV 180
  181 QRLREENKQF KEEDGLRVRK APQTNNPISA SAAVVKDEGH SSRLLALVVL FFVIGVIIGK 240
  241 IAL

Type	Start	End	Confidence
Cytoplasmic	1	221	0.75
Transmembrane Helix	222	242	0.84
Non-Cytoplasmic	243	243	0.83