YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7339568
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATACAAVSA VAVPVASVAN HIASSSSGTP SLAIPRSYEG LNKSFGARIA PRSTSAFRKP  60
   61 VTGVSLKQFS KGKVASARCA SPLVGNVAPD FEAEAVFDQE FVKIKLSEYI GKRYVVLFFY 120
  121 PLDFTFVCPT EITAFSDKHE EFEKLNTEVI GVSTDSVFSH LAWIQTDRKS GGLGDLKYPL 180
  181 VSDLTKKIAE DFGVLIPDQG IALRGLFIID KEGVIQHATI NNLAIGRSVE ETLRTLQAVQ 240
  241 YVQENPDEVC PAGWKPGEKT MKPDTKLSKE YFAQV

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	275	0.99