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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20800441, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNNKNVISL CLFVTTLLFS AVSCAPNDGL RRIGLKKIKL DPNNRLAARI GSNDDSFRAS  60
   61 IRKFHLQNNF AGTGETDIVA LKNYLDAQYY GEISIGTSPQ KFTVIFDTGS SNLWVPSSRC 120
  121 TFSLACYFHA KYRSGRSSTY RRNGTAAAIQ YGTGAIAGFF SYDNVRVGDI VVKNQEFIEA 180
  181 TREPGVVFLA AKFDGILGLG FQEISVGNAV PVWYNMVEQG LIKEPVFSFW LNRKTEEEEG 240
  241 GELVFGGVDP AHYKGEHTYV PVTRKGYWQF DMGDVLIGGK PTGYCAGGCA AIADSGTSLL 300
  301 AGPTAIITMI NHAIGASGVM SQECKTVVAE YGQTILNLLL AETQPKKICS QIGLCTFDGT 360
  361 RGVDMGIESV VDENARKSSG GLHDAGCSAC EMAVVWVQNQ LSRNQTQDQI LSYVNQLCDK 420
  421 MPSPMGESSV GCGDISSLPV VSFTIGGRTF DLRPEEYILK VGEGPVAQCI SGFTAIDIAP 480
  481 PRGPLWILGD VFMGPYHTVF DFGNQRVGFA EAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle