YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5302771, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH VDLNTNGAPK  60
   61 EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE EAMSSGGGTV AFVKVSMDGA 120
  121 PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY 180
  181 EDKDGDWMLV GDVPWPMFVE SCKRLRIMKG SEAIGLGKFS FLFVSISGSF LFFQ

Type	Start	End	Confidence
Cytoplasmic	1	213	0.90
Transmembrane Helix	214	233	0.90
Non-Cytoplasmic	234	234	0.97