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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11358675, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTNVCLWTLL AFMLTWTVFY VTNRGKKATQ LADAVVEERE DGATDVIIVG AGVGGSALAY  60
   61 ALAKDGRRVH VIERDLREPE RIMGEFMQPG GRLMLSKLGL EDCLEGIDAQ KATGMTVYKD 120
  121 GKEAVASFPV DNNNFPFDPS ARSFHNGRFV QRLRQKASSL PNVRLEEGTV KSLIEEKGVI 180
  181 KGVTYKNSAG EETTALAPLT VVCDGCYSNL RRSLNDNNAE VLSYQVGFIS KNCQLEEPEK 240
  241 LKLIMSKPSF TMLYQISSTD VRCVFEVLPN NIPSISNGEM ATFVKNTIAP QVPLKLRKIF 300
  301 LKGIDEGEHI KAMPTKKMTA TLSEKKGVIL LGDAFNMRHP AIASGMMVLL SDILILRRLL 360
  361 QPLSNLGNAQ KISQVIKSFY DIRKPMSATV NTLGNAFSQV LVASTDEAKE AMRQGCYDYL 420
  421 SSGGFRTSGM MALLGGMNPR PISLIYHLCA ITLSSIGHLL SPFPSPLRIW HSLRLFGLAM 480
  481 KMLVPHLKAE GVSQMLFPVN AAAYSKSYMA ATAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle