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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|162463494, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFPFTTGFS SSPALSLGLD NAGGGMVGRM LPVGGAPADG GMARDAADAE NDSRSGSDHL  60
   61 DAMSAGAGAE DEDDAEPGNP RKRKKRYHRH TPQQIQELEA LFKECPHPDE KQRGELSKRL 120
  121 GLDPRQVKFW FQNRRTRMKT QLERHENALL KQENDKLRAE NMAIREAMRS PMCGSCGSPA 180
  181 MLGEVSLEEQ HLCIENARLK DELNRVYALA TKFLGKPMPV LSGPMLQPNL SLPMPSSSLE 240
  241 LAVGGLRGLG SIPSLDEFAG GVSSPLGTVI TPARATGSAP PPMVGVDRSM LLELAISAMD 300
  301 ELVKLAQVDE PLWLPSLSGS PDKKLLNFEE YAHSFSPSVG AVKPVGYVSE ASRESGLVII 360
  361 DNSLALVETL MDVRRWSDMF SCMIAKATVL EEVTSGIAGS RNGALLLMKA ELQVLSPLVP 420
  421 IREVTFLRFC KQLAEGAWAV VDVSIDGLVR DHNSGTASNA GNIRCRRLPS GCVMQDTPNG 480
  481 YCKVTWVEYT EYDEASVHQL YRPLIRSGLA FGARRWLAML QRQCECLAIL MSPDTVSAND 540
  541 SSVITQEGKR SMLKLARRMT ENFCAGVSAS SAREWSKLDG AAGSIGEDVR VMARKSVDEP 600
  601 GEPPGVVLSA RTSVWVPVAP EKLFNFLRDE QLRAEWDILS NGGPMQEMAN IAKGQEHGNS 660
  661 VSLLRASAMS ANQSSMLILQ ETCTDASGSM VVYAPVDIPA MQLVMNGGDS TYVALLPSGF 720
  721 AILPDGPSSV GAEHKTGGSL LTVAFQILVN SQPTAKLTVE SVETVNNLIF CTIKKIKTAL 780
  781 QCDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle