YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21491
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTVMSSLS LKPTFTLEKT SVKGLPSLAR SSSPFKVVAS GVKKLKTDKP YGINGSMALR  60
   61 DGLDASGRKP KGKGVYQYVD KYGANVDGYS PIYNTDEWSP SGDVYVGGTT GLAIWAVTLV 120
  121 GILAGGALLV YNTSALAQ

Type	Start	End	Confidence
Cytoplasmic	1	107	0.67
Transmembrane Helix	108	131	0.84
Non-Cytoplasmic	132	138	0.59