YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117615103, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQKSEPQ KSEPQKSEPQ NGRGALFAGG LAAILASACC LGPLVLIALG FSGAWIGNLT  60
   61 VLEPYRPIFI GAALVALFFA WRRIYRPAQA CKPGEVCAIP QVRATYKLIF WIVAALVLVS 120
  121 LGFPYVMPFF Y

Type	Start	End	Confidence
Cytoplasmic	1	25	0.95
Transmembrane Helix	26	51	0.88
Non-Cytoplasmic	52	64	0.81
Transmembrane Helix	65	85	0.90
Cytoplasmic	86	105	0.96
Transmembrane Helix	106	127	0.92
Non-Cytoplasmic	128	131	0.84