YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27525446
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNYLKSGFI LLLFLFPVAS VQAAGGIALG ATRVIYPADA KQTSLSISNS DTKERYLVNS  60
   61 WIENSAGVKE KSFVVTPPLF VSEPKSENTL RIIYAGVPLP KDRESLFWMN VKAIPSVNKN 120
  121 SLEGKNVLQL AILSRIKLFV RPNNLPQIPE DAPGMLTFSR SGNHLKINNP SAYYVTLVNL 180
  181 NVGKTKVDNV MVAPKSDAQV LLPTGVQGNV TFQTVNDYGA VTPAQTVSVR

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	230	0.99